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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7773012_7773735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7773012 - 7773735

Intron Length:

724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

GCTTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAT

U12 Branch Point Sequence:

ATTCTCCTATTC

Flanking Amino Acid:

LIVDSYSEVLFFVHSLLLLS

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

69.3

36.6

Major BPS

58.9

0.22

1.2

54.7

43.1

Major PPT

80.7

0.69

0.9

76.9

37.3

Minor 5ss

36.5

-1.5

3.2

39.8

Minor BPS

47.9

-0.1

1.9

62.61

36.8

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328