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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7773902_7774637_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7773902 - 7774637

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCA

5'SS Class:

major

3'SS Sequence:

TTCTGCATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TATTTCTGCATT

Flanking Amino Acid:

MGIYSVMIAKMILRDLCRFM

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

1.3

71.6

40.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

79.9

0.67

0.9

73.1

Minor 5ss

29.9

-2.3

2.6

34.3

Minor BPS

55.1

0.24

1.9

77.52

39.1

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328