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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7774705_7775111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7774705 - 7775111

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTTTTGTAACA

Flanking Amino Acid:

YLVFLLGFSTAVVTLIEDDN

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.3

31.6

Major BPS

100

1.24

0.5

100

Major PPT

80.1

0.68

0.9

76.7

36.2

Minor 5ss

38.3

-1.3

49.1

46.6

Minor BPS

60.2

0.32

73.92

38.7

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026851

7766735 - 7776053

9319

ENSAPLT00000004911

7767841 - 7777168

9328