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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7776481_7777001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7776481 - 7777001

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GAAAAAATAACC

Flanking Amino Acid:

NPSYSIKPGRVSGKNWKTLV

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

84.1

26.5

Major BPS

61.3

0.28

30.6

Major PPT

88.9

0.88

0.6

88.5

21.1

Minor 5ss

30.9

-2.2

3.5

46.6

48.7

Minor BPS

42.3

-0.6

1.9

50.38

38.3

Associated Gene:

Gene:

TRPV1

Ensembl Gene ID:

ENSAPLG00000004676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004911

7767841 - 7777168

9328