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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7827204_7827986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7827204 - 7827986

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATGCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGATACTAAATT

Flanking Amino Acid:

ANAGKNLNAYRAEEKTPSTK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

1.1

81.4

27.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.4

0.62

73.8

41.4

Minor 5ss

35.9

-1.6

2.6

41.2

45.2

Minor BPS

0.3

1.9

74.75

41.9

Associated Gene:

Gene:

SPATA22

Ensembl Gene ID:

ENSAPLG00000004418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004529

7825651 - 7830310

4660