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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7828342_7828663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7828342 - 7828663

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

GTGTATCTAACT

Flanking Amino Acid:

FDCVPEDKIQEVSSSEIKPK

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

64.4

0.32

1.1

66.7

33.3

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

54.5

0.22

1.9

74.53

41.9

Associated Gene:

Gene:

SPATA22

Ensembl Gene ID:

ENSAPLG00000004418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004529

7825651 - 7830310

4660