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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7829734_7830118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7829734 - 7830118

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTGTTTATT

Flanking Amino Acid:

ESLPCVFYEIDRELPRLIRG

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

85.6

30.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

63.2

0.3

1.2

Minor 5ss

44.2

-0.6

2.9

66.4

38.5

Minor BPS

55.3

0.25

2.3

83.03

38.5

Associated Gene:

Gene:

SPATA22

Ensembl Gene ID:

ENSAPLG00000004418

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004529

7825651 - 7830310

4660