Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_7919748_7920817_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7919748 - 7920817

Intron Length:

1070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGGGAG

5'SS Class:

major

3'SS Sequence:

TCTGGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAG

U12 Branch Point Sequence:

TTTTTGTTGTCT

Flanking Amino Acid:

AQNDAMILYDKYFSLQATHP

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

62.8

37.6

Major BPS

45.3

-0.2

1.5

41.4

Major PPT

72.4

0.51

65.3

41.1

Minor 5ss

24.8

-2.9

3.4

28.5

37.7

Minor BPS

43.2

-0.4

3.8

82.19

39.8

Associated Gene:

Gene:

AKAP10

Ensembl Gene ID:

ENSAPLG00000004170

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044519

7909732 - 7926598

16867

ENSAPLT00000004285

7909732 - 7927390

17659