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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7929708_7929835_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7929708 - 7929835

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGGGGGTC

5'SS Class:

weak_major

3'SS Sequence:

TCCCGGTGCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGCT

U12 Branch Point Sequence:

TGCCCCCGGGCT

Flanking Amino Acid:

DGALRDPLAAPAVPQGAAPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.1

53.6

Major BPS

27.3

-1.4

4.1

46.5

Major PPT

46.5

-0.2

1.7

52.3

41.6

Minor 5ss

29.9

-2.3

3.9

49.5

47.1

Minor BPS

-1.1

3.5

59.3

43.6

Associated Gene:

Gene:

NLE1

Ensembl Gene ID:

ENSAPLG00000003941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004055

7929651 - 7936400

6750