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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7929995_7930068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7929995 - 7930068

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCGCTAT

U12 Branch Point Sequence:

CCCGCGCTATCG

Flanking Amino Acid:

QLVCNALLQEDEPVPLAFFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

41.4

-0.5

1.4

32.1

43.1

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

25.6

-2.8

30.2

Minor BPS

34.8

-1.2

2.3

34.68

46.3

Associated Gene:

Gene:

NLE1

Ensembl Gene ID:

ENSAPLG00000003941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004055

7929651 - 7936400

6750