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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7933886_7934243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7933886 - 7934243

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CTTTCTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

TTCTTCTTAGCC

Flanking Amino Acid:

TINPQDVSGSLAELKEKARQ

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.4

36.6

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

84.5

0.78

0.7

77.4

31.3

Minor 5ss

35.9

-1.6

3.2

51.5

44.9

Minor BPS

70.2

0.61

1.5

77.69

38.5

Associated Gene:

Gene:

NLE1

Ensembl Gene ID:

ENSAPLG00000003941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004055

7929651 - 7936400

6750