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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7935902_7936387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7935902 - 7936387

Intron Length:

486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTCAG

U12 Branch Point Sequence:

TTTCTGTCCACA

Flanking Amino Acid:

ASGGKDKCLRIWRR*

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

48.2

-0.1

1.6

57.3

41.7

Major PPT

81.4

0.71

0.8

76.1

32.5

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

43.4

-0.5

2.5

64.43

42.1

Associated Gene:

Gene:

NLE1

Ensembl Gene ID:

ENSAPLG00000003941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004055

7929651 - 7936400

6750