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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7974193_7974704_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7974193 - 7974704

Intron Length:
512

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGCATT

5'SS Class:
strong_major

3'SS Sequence:
CTTTTTTGTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CATTCAT

U12 Branch Point Sequence:
TTGTTCTGCATT

Flanking Amino Acid:
GDQHSKATFGRSVSTGKLSD

Intron Amino Acid Position:
701

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.3
0.78
1
81.8
38.5

Major BPS
79.8
0.74
0.9
81.3
29.9

Major PPT
82.2
0.72
0.8
76.9
37.3

Minor 5ss
43.9
-0.7
3.2
65.5
45.8

Minor BPS
53.5
0.19
1.9
75.93
41.4

Associated Gene:

Gene:
ULK2

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7943698 - 7982197
38500