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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7980605_7980704_F


Intron Information:

Intron Rank:
27

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
7980605 - 7980704

Intron Length:
100

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTAAGTTTA

5'SS Class:
major

3'SS Sequence:
TTCTGTTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AATTCAT

U12 Branch Point Sequence:
CTTTTTTGACCT

Flanking Amino Acid:
DPADIENVHKYKSSIERRLS

Intron Amino Acid Position:
1056

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.6
0.63
1.1
77
34.4

Major BPS
83.4
0.83
0.8
83.7
25.7

Major PPT
89.5
0.89
0.7
87.9
29.5

Minor 5ss
45.8
-0.4
2.8
59
45.5

Minor BPS
55.4
0.25
1.8
75.64
41.7

Associated Gene:

Gene:
ULK2

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7943698 - 7982197
38500