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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7986635_7987121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7986635 - 7987121

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TGAGTCTGACTC

Flanking Amino Acid:

ADLLPQYLDEELYPVVTGGV

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

63.7

0.34

1.2

41.8

Major PPT

80.3

0.68

0.8

73.8

31.3

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

45.1

-0.3

1.7

52.09

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018266

7985790 - 7991726

5937

ENSAPLT00000003343

7985790 - 7991726

5937

ENSAPLT00000002758

7985790 - 7991726

5937

ENSAPLT00000031337

7986164 - 7999500

13337

ENSAPLT00000026106

7985790 - 7999500

13711