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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7987331_7987469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7987331 - 7987469

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGGCTG

5'SS Class:

major

3'SS Sequence:

CCTGTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GGGGACTGGAGG

Flanking Amino Acid:

DKDCDLAVACRRITWGKYMN

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.4

55.2

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

75.1

0.56

0.9

68.7

37.2

Minor 5ss

28.4

-2.5

3.5

38.1

46.8

Minor BPS

37.2

-1.1

1.9

33.53

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018266

7985790 - 7991726

5937

ENSAPLT00000003343

7985790 - 7991726

5937

ENSAPLT00000002758

7985790 - 7991726

5937

ENSAPLT00000031337

7986164 - 7999500

13337

ENSAPLT00000026106

7985790 - 7999500

13711