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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7987588_7987717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7987588 - 7987717

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAA

U12 Branch Point Sequence:

GGTGAGTGAAGG

Flanking Amino Acid:

VVENIKATLQEFYGEDVKKS

Intron Amino Acid Position:

270

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

48.6

-0

1.3

41.1

41.4

Major PPT

70.9

0.47

64.6

41.3

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

35.3

-1.2

2.3

38.65

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018266

7985790 - 7991726

5937

ENSAPLT00000003343

7985790 - 7991726

5937

ENSAPLT00000002758

7985790 - 7991726

5937

ENSAPLT00000031337

7986164 - 7999500

13337

ENSAPLT00000026106

7985790 - 7999500

13711