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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7988680_7989507_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7988680 - 7989507

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TGTGGTGTGACC

Flanking Amino Acid:

FLSTLPFGGVGNSGMGAYHG

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

78.7

31.6

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

73.5

0.53

65.1

45.5

Minor 5ss

39.8

-1.1

53.4

43.8

Minor BPS

42.7

-0.5

2.4

57.52

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018266

7985790 - 7991726

5937

ENSAPLT00000003343

7985790 - 7991726

5937

ENSAPLT00000002758

7985790 - 7991726

5937