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Intron Name: Anas_platyrhynchos_platyrhynchos_20_799586_802439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

799586 - 802439

Intron Length:

2854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAATCCT

5'SS Class:

major

3'SS Sequence:

CCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

GACCCCGCATGT

Flanking Amino Acid:

PPCCAHPAATGAGDGDDDDA

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

64.7

41.1

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

0.5

0.8

65.4

30.4

Minor 5ss

30.3

-2.3

33.8

41.4

Minor BPS

-1

2.3

47.5

44.4

Associated Gene:

Gene:

CLDN4

Ensembl Gene ID:

ENSAPLG00000028173

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014401

798721 - 803618

4898