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Intron Name: Anas_platyrhynchos_platyrhynchos_20_7998682_7998846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7998682 - 7998846

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAG

U12 Branch Point Sequence:

TTCTCTGTGAGA

Flanking Amino Acid:

LGVVAAVMIKVMFP*

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

48.2

-0.1

1.6

57.3

41.7

Major PPT

71.1

0.47

0.9

67.2

35.3

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

47.8

-0.1

2.3

65.36

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002714

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026106

7985790 - 7999500

13711