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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8000116_8000234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8000116 - 8000234

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGGCTG

5'SS Class:

major

3'SS Sequence:

CTTCTTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCCAT

U12 Branch Point Sequence:

CCTCGCTGACCC

Flanking Amino Acid:

LPAAAVRGCVAGVEAQNGVV

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.5

46.9

Major BPS

50.9

0.02

1.3

60.4

37.5

Major PPT

84.9

0.78

0.8

79.9

32.1

Minor 5ss

33.3

-1.9

3.6

46.8

48.5

Minor BPS

43.2

-0.5

2.1

52.11

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019862

7999567 - 8001209

1643