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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8001743_8001984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8001743 - 8001984

Intron Length:

242

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATTAC

U12 Branch Point Sequence:

GCCCCATTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.2

37.2

Major BPS

49.9

-0

1.2

43.3

37.4

Major PPT

71.7

0.49

64.3

41.5

Minor 5ss

-2.1

3.6

44.7

44.3

Minor BPS

48.1

-0

1.9

63.23

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018341

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024345

7999914 - 8002052

2139