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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8007097_8007460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8007097 - 8007460

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

CCTTGCTAAAAT

Flanking Amino Acid:

LMFAAKMGVLGLWVGMIVCI

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

73.1

0.58

73.8

32.3

Major PPT

84.9

0.78

0.7

79.8

25.6

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

48.4

-0

2.2

68.4

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001125

8005891 - 8015218

9328