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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8012049_8012458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8012049 - 8012458

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGGT

5'SS Class:

major

3'SS Sequence:

TCTCTCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

GTATCCTTAACT

Flanking Amino Acid:

LLIQQDPEVSRLTQVYVMIF

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

68.6

39.4

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

0.86

0.7

80.3

31.7

Minor 5ss

26.4

-2.7

3.4

38.7

46.4

Minor BPS

88.3

1.28

0.9

94.24

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001125

8005891 - 8015218

9328