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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8115666_8120999_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8115666 - 8120999

Intron Length:

5334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

CTCTCCTCATCA

Flanking Amino Acid:

GIPQIRQLSERVKAAQNELG

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

34.2

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

75.1

0.57

0.8

74.1

29.5

Minor 5ss

36.4

-1.5

3.3

47.9

47.8

Minor BPS

55.7

0.18

1.9

67.27

45.2

Associated Gene:

Gene:

VPS53

Ensembl Gene ID:

ENSAPLG00000007767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008168

8096741 - 8157683

60943