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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8124079_8125933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8124079 - 8125933

Intron Length:

1855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

AACCTTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTTTTTTTAACC

Flanking Amino Acid:

SGCTLGDGTVKKPDVPPLST

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

87.3

0.93

0.8

36.5

Major PPT

67.1

0.39

61.2

38.4

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

78.8

0.88

1.1

81.25

33.5

Associated Gene:

Gene:

VPS53

Ensembl Gene ID:

ENSAPLG00000007767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008168

8096741 - 8157683

60943