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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8129298_8133849_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8129298 - 8133849

Intron Length:

4552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

ACATACTAAAAT

Flanking Amino Acid:

HLYVYIESQDKNLSELIDRF

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

77.1

0.61

0.8

72.4

32.2

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

48.7

-0

1.9

65.67

44.2

Associated Gene:

Gene:

VPS53

Ensembl Gene ID:

ENSAPLG00000007767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008168

8096741 - 8157683

60943