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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8135719_8136634_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8135719 - 8136634

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

TGTTTCCTAACA

Flanking Amino Acid:

AEYCLATTQQLEEKLKEKVD

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

78.7

0.65

0.9

74.1

35.4

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

70.1

0.63

1.6

80.78

34.3

Associated Gene:

Gene:

VPS53

Ensembl Gene ID:

ENSAPLG00000007767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008168

8096741 - 8157683

60943