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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8140224_8145645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8140224 - 8145645

Intron Length:

5422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAC

U12 Branch Point Sequence:

TTTTGCTTGTTT

Flanking Amino Acid:

CDPALTAMSKMQWQNVEHVG

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

55.1

0.13

1.2

66.7

Major PPT

74.3

0.55

0.9

68.7

31.7

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

45.2

-0.3

3.7

82.57

39.6

Associated Gene:

Gene:

VPS53

Ensembl Gene ID:

ENSAPLG00000007767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008168

8096741 - 8157683

60943