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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8238437_8242087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8238437 - 8242087

Intron Length:

3651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

GTGCTCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAC

U12 Branch Point Sequence:

ACAGCCCCACTC

Flanking Amino Acid:

TDEDMIRKTLRISVCDEDKF

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

55.8

40.2

Major BPS

64.9

0.37

29.8

Major PPT

77.5

0.62

0.9

73.6

36.9

Minor 5ss

31.1

-2.2

3.5

43.2

44.1

Minor BPS

38.3

-0.9

1.9

42.22

38.7

Associated Gene:

Gene:

DOC2B

Ensembl Gene ID:

ENSAPLG00000026482

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023028

8232829 - 8244385

11557