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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8248434_8248609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8248434 - 8248609

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAATAT

U12 Branch Point Sequence:

ATATCAGGCACG

Flanking Amino Acid:

ELEGFMVSLTGIVGLWSLAI

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

50.9

0.02

1.1

47.4

35.7

Major PPT

0.47

0.8

64.1

31.2

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

37.7

-1.1

2.5

48.92

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009115

8248088 - 8250354

2267