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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8256097_8257074_R


Intron Information:

Intron Rank:
30

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8256097 - 8257074

Intron Length:
978

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTTAGCTGA

5'SS Class:
major

3'SS Sequence:
CCTGTCATTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATAAAAT

U12 Branch Point Sequence:
AATCCTGTCATT

Flanking Amino Acid:
IQEQPQGHALGAASLKDPED

Intron Amino Acid Position:
1497

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.8
0.4
1.3
58
43.7

Major BPS
61.8
0.29
1.1
67.7
34.6

Major PPT
65.9
0.36
1.1
68.2
36.5

Minor 5ss
39.1
-1.2
2.8
40.2
45.6

Minor BPS
44.3
-0.3
2.3
64.51
40.5

Associated Gene:

Gene:
TEX14

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8282257
29298

8252960 - 8308584
55625