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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8257462_8258982_R


Intron Information:

Intron Rank:
28

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8257462 - 8258982

Intron Length:
1521

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTTAGTTGA

5'SS Class:
major

3'SS Sequence:
TTTATGTGAATAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAA

U12 Branch Point Sequence:
TTGCTATTAAAT

Flanking Amino Acid:
GLFDCGMQINVAGQIKMEDR

Intron Amino Acid Position:
1426

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1.2
68.9
38.4

Major BPS
82.6
0.81
0.8
82.2
24.5

Major PPT
65.6
0.35
1.1
62.3
43.2

Minor 5ss
36.1
-1.6
2.6
39
40.5

Minor BPS
57.2
0.3
1.7
75.82
40.3

Associated Gene:

Gene:
TEX14

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8282257
29298

8252960 - 8308584
55625

8252960 - 8308584
55625