Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8262961_8264087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8262961 - 8264087

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

TTCAATACTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTTTCAATACTT

Flanking Amino Acid:

EPQEDSKEKDISVTDIQDLS

Intron Amino Acid Position:

1253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

34.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

74.6

0.55

0.9

70.7

39.4

Minor 5ss

34.1

-1.8

3.4

47.8

41.1

Minor BPS

48.4

-0

2.1

73.84

43.2

Associated Gene:

Gene:

TEX14

Ensembl Gene ID:

ENSAPLG00000009018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021571

8252960 - 8308584

55625

ENSAPLT00000021417

8252960 - 8308584

55625

ENSAPLT00000018986

8252960 - 8308584

55625

ENSAPLT00000039575

8252960 - 8308584

55625

ENSAPLT00000009406

8252960 - 8282257

29298

ENSAPLT00000027231

8252960 - 8308584

55625