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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8266540_8266846_R


Intron Information:

Intron Rank:
19

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8266540 - 8266846

Intron Length:
307

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTATGTATA

5'SS Class:
major

3'SS Sequence:
ACATCTTTCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAA

U12 Branch Point Sequence:
AGCATCTTAAAT

Flanking Amino Acid:
IPQQAEILSRGHSRELPCSH

Intron Amino Acid Position:
1133

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.1
73.4
37.3

Major BPS
77.8
0.69
1
78.2
31.8

Major PPT
74.5
0.55
0.9
68.3
36.6

Minor 5ss
46.7
-0.3
2.5
56
42.5

Minor BPS
58.9
0.36
1.5
69.02
41.4

Associated Gene:

Gene:
TEX14

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8308584
55625

8252960 - 8282257
29298

8252960 - 8308584
55625