Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8266948_8267493_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8266948 - 8267493

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

TGTGACATCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TTTAGCCTAATG

Flanking Amino Acid:

DLESMFISSGGRSCQSPSQY

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.3

47.1

Major BPS

76.8

0.67

40.9

Major PPT

61.8

0.27

51.9

42.4

Minor 5ss

33.9

-1.8

3.4

39.3

Minor BPS

49.5

-0.1

2.2

64.83

43.1

Associated Gene:

Gene:

TEX14

Ensembl Gene ID:

ENSAPLG00000009018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027231

8252960 - 8308584

55625

ENSAPLT00000021417

8252960 - 8308584

55625

ENSAPLT00000018986

8252960 - 8308584

55625

ENSAPLT00000009406

8252960 - 8282257

29298

ENSAPLT00000039575

8252960 - 8308584

55625