Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8275780_8276244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8275780 - 8276244

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

GGTGCTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TTCGGTTTATGT

Flanking Amino Acid:

RNIYSFGFGKFYLAGSRHLG

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

74.5

0.55

69.7

41.5

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

43.2

-0.4

2.2

62.39

48.2

Associated Gene:

Gene:

TEX14

Ensembl Gene ID:

ENSAPLG00000009018

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018986

8252960 - 8308584

55625

ENSAPLT00000039575

8252960 - 8308584

55625

ENSAPLT00000009406

8252960 - 8282257

29298

ENSAPLT00000027231

8252960 - 8308584

55625

ENSAPLT00000021571

8252960 - 8308584

55625

ENSAPLT00000021417

8252960 - 8308584

55625