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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8371044_8371147_R


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8371044 - 8371147

Intron Length:
104

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CAG|GCAAGTACA

5'SS Class:
strong_major

3'SS Sequence:
CTTCCCATTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCCAT

U12 Branch Point Sequence:
CTTCCCATTACA

Flanking Amino Acid:
QRPGVTAASDRTGNESPQLA

Intron Amino Acid Position:
1012

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99
1.16
0.7
89.2
23.6

Major BPS
72.3
0.55
1.2
80.7
33.2

Major PPT
79.9
0.67
0.8
73
30.3

Minor 5ss
25.7
-2.8
3.6
34.4
41.2

Minor BPS
54
0.12
2
70.3
41.3

Associated Gene:

Gene:
TRIM37

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8370860 - 8403209
32350