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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8407141_8408377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8407141 - 8408377

Intron Length:

1237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAGTC

5'SS Class:

major

3'SS Sequence:

TTTTATTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTT

Flanking Amino Acid:

QTLQQHADLQRSPLSEEEQT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

64.2

40.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.9

0.85

0.7

81.4

35.9

Minor 5ss

39.1

-1.2

3.7

58.5

46.3

Minor BPS

59.2

0.37

1.5

72.97

39.1

Associated Gene:

Gene:

SKA2

Ensembl Gene ID:

ENSAPLG00000014130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014720

8404341 - 8411241

6901