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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8409400_8411217_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8409400 - 8411217

Intron Length:

1818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATTC

5'SS Class:

strong_major

3'SS Sequence:

CTAAATATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTTTTTAAAT

Flanking Amino Acid:

MVLTYNAKFQKAESDLDY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

81.1

26.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.38

63.2

42.3

Minor 5ss

37.1

-1.5

3.2

49.9

46.6

Minor BPS

72.7

0.79

1.3

84.29

36.6

Associated Gene:

Gene:

SKA2

Ensembl Gene ID:

ENSAPLG00000014130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014720

8404341 - 8411241

6901