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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8429259_8430187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8429259 - 8430187

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GATTGTTTGATT

Flanking Amino Acid:

VHKFHLLPKAGEKPEADRNP

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

81.1

0.7

78.7

29.3

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

56.1

0.27

1.8

72.09

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045592

8427560 - 8431858

4299

ENSAPLT00000014511

8427560 - 8433526

5967