Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8430334_8430736_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8430334 - 8430736

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTTTTTGCATT

Flanking Amino Acid:

IKAANYDFYQLLEEKCCGKL

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

1.1

84.4

33.5

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.68

0.8

32.3

Minor 5ss

43.9

-0.7

2.6

61.4

42.9

Minor BPS

54.5

0.22

1.9

79.72

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013932

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045592

8427560 - 8431858

4299

ENSAPLT00000014511

8427560 - 8433526

5967