Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_8449305_8449974_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8449305 - 8449974

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAGTGT

5'SS Class:

major

3'SS Sequence:

TTCCATACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCTTCCATACTG

Flanking Amino Acid:

FDHLTARGIQVYIWVLNEEQ

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.53

65.5

40.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.5

0.6

0.9

70.3

34.6

Minor 5ss

43.9

-0.7

3.3

64.5

46.9

Minor BPS

53.2

-0

63.85

44.5

Associated Gene:

Gene:

GDPD1

Ensembl Gene ID:

ENSAPLG00000013798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014417

8434980 - 8450097

15118