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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8506865_8507447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8506865 - 8507447

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GGTCGCTTAAAT

Flanking Amino Acid:

PEGDILVFLTGQNEIEKACD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

84.1

26.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.83

0.8

84.8

35.4

Minor 5ss

32.6

-2

42.8

44.4

Minor BPS

55.4

0.25

1.9

72.87

43.1

Associated Gene:

Gene:

DHX40

Ensembl Gene ID:

ENSAPLG00000013368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033287

8505521 - 8519427

13907

ENSAPLT00000013968

8505521 - 8519519

13999

ENSAPLT00000036339

8505521 - 8518416

12896