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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8507580_8511173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8507580 - 8511173

Intron Length:

3594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GTTTTACTAACT

Flanking Amino Acid:

ILPLYGSMSTDQQKRIFLPA

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.4

0.62

0.9

73.6

35.6

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

59.4

0.37

1.9

82.74

37.8

Associated Gene:

Gene:

DHX40

Ensembl Gene ID:

ENSAPLG00000013368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036339

8505521 - 8518416

12896

ENSAPLT00000033287

8505521 - 8519427

13907

ENSAPLT00000013968

8505521 - 8519519

13999