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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8511813_8512334_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8511813 - 8512334

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTCCCT

Flanking Amino Acid:

LDILEVVPISKSEAMQRAGR

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

81.6

33.2

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

69.7

0.44

1.1

65.2

45.5

Minor 5ss

45.5

-0.5

2.8

58.6

40.2

Minor BPS

45.4

-0.2

3.6

82.56

39.6

Associated Gene:

Gene:

DHX40

Ensembl Gene ID:

ENSAPLG00000013368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036339

8505521 - 8518416

12896

ENSAPLT00000033287

8505521 - 8519427

13907

ENSAPLT00000013968

8505521 - 8519519

13999