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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8513994_8515803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8513994 - 8515803

Intron Length:

1810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TATAACTTATTT

Flanking Amino Acid:

LSVENVFIRPGDPQKQKEAE

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

82.3

0.73

0.8

80.7

31.2

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

55.9

0.26

1.8

75.26

41.2

Associated Gene:

Gene:

DHX40

Ensembl Gene ID:

ENSAPLG00000013368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033287

8505521 - 8519427

13907

ENSAPLT00000013968

8505521 - 8519519

13999

ENSAPLT00000036339

8505521 - 8518416

12896