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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8515919_8516207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8515919 - 8516207

Intron Length:

289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATAAACT

5'SS Class:

major

3'SS Sequence:

TTTCTCTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCTTTATAATG

Flanking Amino Acid:

LLNIFEQCKTSKSPSAWCQK

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

73.2

35.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

89.1

0.88

0.6

88.3

21.3

Minor 5ss

41.6

-0.9

58.8

45.4

Minor BPS

56.3

0.06

1.6

63.07

39.8

Associated Gene:

Gene:

DHX40

Ensembl Gene ID:

ENSAPLG00000013368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033287

8505521 - 8519427

13907

ENSAPLT00000013968

8505521 - 8519519

13999

ENSAPLT00000036339

8505521 - 8518416

12896