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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8517986_8519495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8517986 - 8519495

Intron Length:

1510

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

ATTTATTTACTT

Flanking Amino Acid:

KHKEDLKRQCACPL*

Intron Amino Acid Position:

531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

79.8

35.3

Major BPS

81.6

0.78

0.8

24.9

Major PPT

76.9

0.6

71.7

38.2

Minor 5ss

43.1

-0.8

2.9

54.5

43.9

Minor BPS

59.5

0.38

1.8

78.91

37.7

Associated Gene:

Gene:

DHX40

Ensembl Gene ID:

ENSAPLG00000013368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013968

8505521 - 8519519

13999