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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8529550_8531719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8529550 - 8531719

Intron Length:

2170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

ACCTGGCTAACA

Flanking Amino Acid:

NPASKVIALKAGKTLQIFNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

57.4

0.18

1.3

65.4

Major PPT

83.8

0.76

0.9

36.6

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

41.3

-0.6

2.5

53.72

44.9

Associated Gene:

Gene:

CLTC

Ensembl Gene ID:

ENSAPLG00000012095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022160

8529318 - 8551874

22557

ENSAPLT00000012724

8529318 - 8551874

22557